I use HOMER to call peaks getting peaks.txt file. Then I use pos2bed.pl to transform peaks.txt to peaks.bed However, the column 6 loss after the transform, which showed the normalized tag count (equal to RPKM reflecting peak density).
Question: how to keep column 6 (normalized tag count) in peaks.txt file called by Homer callpeaks after pos2bed manipulation?
14 months ago by
Ming Lu • 0
Ming Lu • 0 wrote:
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