Question: VCF files examples
0
gravatar for gaitat
2.1 years ago by
gaitat0
gaitat0 wrote:

I would appreciate your help in finding sources for VCF example files; i.e. with SVTYPE data.

format structural variants vcf • 1.7k views
ADD COMMENTlink modified 2.1 years ago by Pierre Lindenbaum124k • written 2.1 years ago by gaitat0
2
gravatar for Pierre Lindenbaum
2.1 years ago by
France/Nantes/Institut du Thorax - INSERM UMR1087
Pierre Lindenbaum124k wrote:

google for lumpy vcf : https://www.google.com/search?q=Lumpy+filetype%3Avcf

e.g: https://github.com/VCCRI/SVPV/blob/master/example/lumpy.vcf

ADD COMMENTlink written 2.1 years ago by Pierre Lindenbaum124k
0
gravatar for st.ph.n
2.1 years ago by
st.ph.n2.5k
Philadelphia, PA
st.ph.n2.5k wrote:

hts-specs

ADD COMMENTlink written 2.1 years ago by st.ph.n2.5k

I have seen the specs. I would like public VCF example files

ADD REPLYlink written 2.1 years ago by gaitat0
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