Hi! I'm really desperate! I'm trying to use RAPIDR package, but I receive always this error:
No outcomes for Sample 001 No outcomes for Sample 003 Error in `[.data.frame`(sampleIDs.with.outcomes, , "Gender") : undefined columns selected
but I follow literally the tutorial! I work with ION Torrent bam but for align problem I used FASTQ file, I aligned with bowtie2 and sorted and indexed with samtools.
Is there anyone who use this package and can help me? I really need it!