construction of gene co-expression network based on CPM values
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6.4 years ago
Neu ▴ 10

Hi, Will it be correct to generate gene co-expression network from count per million (CPM) values?

RNA-Seq next-gen • 1.7k views
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6.4 years ago

Depends on which tool you are aiming to use. If it's something like WGCNA or by following this method, then it will be based just on correlation and therefore it's 'okay'.

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