Question: package 'karyoploteR' is not available (for R version 3.3.3)
0
gravatar for kalahari
4 weeks ago by
kalahari0
kalahari0 wrote:
source("https://bioconductor.org/biocLite.R")

library(rlang)
library(karyoploteR)
library(biomaRt)
library(regioneR)
library(GenomicRanges)

package 'karyoploteR' is not available (for R version 3.3.3)

I've downloaded all packages, updated everything but this message wont disappear.

platform x86_64-apple-darwin13.4.0
arch x86_64
os darwin13.4.0
system x86_64, darwin13.4.0
status
major 3
minor 3.3
year 2017
month 03
day 06
svn rev 72310
language R
version.string R version 3.3.3 (2017-03-06) nickname Another Canoe

karyoploter R • 185 views
ADD COMMENTlink modified 4 weeks ago by Charles Plessy2.4k • written 4 weeks ago by kalahari0

Did you follow the instructions for installation? https://bioconductor.org/packages/release/bioc/html/karyoploteR.html

ADD REPLYlink written 4 weeks ago by WouterDeCoster25k
0
gravatar for Charles Plessy
4 weeks ago by
Charles Plessy2.4k
Japan
Charles Plessy2.4k wrote:

The karyotypeR page on the Bioconductor website indicates that the karyotypeR package requires a version of R equal or higher to 3.4. So you would need to upgrade R (or install R >= 3.4 in parallel with your current version), in order to use karyotypeR.

ADD COMMENTlink written 4 weeks ago by Charles Plessy2.4k
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