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  Qn: does a large variation in insert sizes for paired end Illumina sequencing affect SNP calling?...
• IGV Visualization Insert Size
  Hi, I am visualizing alignments using IGV. I want to ask what do you mean by Insert? Is insert ...
• Structural variation detection from RNA-seq
  Hello I have two sets of reads that were obtained from RNA bulks of resistant and susceptible wh...
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• large insertion/deletion detection from NGS data
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• Structural Variations With Gasvpro
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• How to visualize Proteome Networks
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• Is annovar suitable for structural rearrangements instead of SNPs or INDEL?
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• IGV how to calculate the "expected insert size"?
  I am confused with how to calculate the expected insert size when using IGV software seeing red o...
• IGB Visualization for Depth Graph
  Hello, I am having some difficulties visualizing my depth graph on the IGB software. Is there a...
• Fragment size for Illumina Miseq 2 x 250-bp sequencing
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• Is this mate pair insert size distribution to broad?
  I got Illumina mate pair data. The insert size distribution is as follows: http://imgur.com/bhKr...
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• Estimate insert size for pacbio long reads
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• Best experimental/bioinfo protocol to genotype large insertions?
  Hello, I am trying to find what would be the best way to identify a large insertion (~1kb) in a ...
• PBSuite spots ambiguous insertion output value
  Hi, I am using PBSuite version 15.8.24 `Honey.py spots` was used to identify structure variation...
• Breakdancer Bam2Cfg.Pl , Coefficient Of Variation Is Too Large, Not Excluding Outliers?
  When running breakdancer bam2cfg.pl I get the following error. breakDancer_1.4.1/breakdancer/pe...
• RNASEQ preprocessing and insert size
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  What would be the best way to align multiple gene sequences that all have various large insertion...
• Inversion detection for very large (2 megabase pairs plus )inversions for mapping?
  Hello biostars, I wanted to know if any of you has had any experience with software detecting ve...