Question: Analysis of paired-end GBS data
gravatar for Denis
2.6 years ago by
Denis190 wrote:

Hi there!

I'm working on GBS data analysis of plants with available reference genome. I already tried Tassel 5 GBS v2 pipeline ( and it performed quite well on our data. The main issue that Tassel doesn't accept paired-end (PE) data that we alredy have got. Would you advise me an efficient pipeline for GBS data analysis that's able to handle Illumina PE data please?

snp next-gen genome • 1.3k views
ADD COMMENTlink written 2.6 years ago by Denis190

Have you got any solution to above mentioned problem?

ADD REPLYlink written 12 months ago by toralmanvar840

Hi! Try GB-easy

ADD REPLYlink modified 10 months ago by lakhujanivijay5.1k • written 12 months ago by Denis190
Please log in to add an answer.


Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 639 users visited in the last hour