How can I uninstall my packages in Rstudio
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4.8 years ago
hassanlou110 ▴ 40

I want to uninstall Bioconductor affycoretools package and reinstall it, who can help me?

R Bioconductor • 172k views
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You can try to update the already existing package.

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4.8 years ago
Mike Smith ★ 1.9k

Remove a package with remove.packages() e.g.

remove.packages("affycoretools")

Affycoretools is a Bioconductor pacakge, so reinstallation needs their install script / the BiocInstaller package e.g.

source("https://bioconductor.org/biocLite.R")
biocLite("affycoretools")

Edit: To install this package, start R (version "4.0") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("affycoretools")
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4.8 years ago

Go to the Packages in right bottom corner of Rstudio, sear the package name and click on the adjacent X icon to remove it.

Rstudio Screenshot

Reinstall the package from Bioconductor/CRAN.

##Bioconductor
source("https://bioconductor.org/biocLite.R")
biocLite("affycoretools")
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