Question: How can I uninstall my packages in Rstudio
1
gravatar for hassanlou110
2.7 years ago by
hassanlou11030
hassanlou11030 wrote:

I want to uninstall Bioconductor affycoretools package and reinstall it, who can help me?

bioconductor R • 62k views
ADD COMMENTlink modified 6 weeks ago by zx87549.7k • written 2.7 years ago by hassanlou11030
2

You can try to update the already existing package.

ADD REPLYlink written 2.7 years ago by arta590
4
gravatar for Mike Smith
2.7 years ago by
Mike Smith1.6k
EMBL Heidelberg / de.NBI
Mike Smith1.6k wrote:

Remove a package with remove.packages() e.g.

remove.packages("affycoretools")

Affycoretools is a Bioconductor pacakge, so reinstallation needs their install script / the BiocInstaller package e.g.

source("https://bioconductor.org/biocLite.R")
biocLite("affycoretools")

Edit: To install this package, start R (version "4.0") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("affycoretools")
ADD COMMENTlink modified 6 weeks ago by zx87549.7k • written 2.7 years ago by Mike Smith1.6k
2
gravatar for Arup Ghosh
2.7 years ago by
Arup Ghosh2.7k
India
Arup Ghosh2.7k wrote:

Go to the Packages in right bottom corner of Rstudio, sear the package name and click on the adjacent X icon to remove it.

Rstudio Screenshot

Reinstall the package from Bioconductor/CRAN.

##Bioconductor
source("https://bioconductor.org/biocLite.R")
biocLite("affycoretools")
ADD COMMENTlink written 2.7 years ago by Arup Ghosh2.7k
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1636 users visited in the last hour