Question: k means for differential gene cluster
0
gravatar for limin201709
15 months ago by
limin20170910
limin20170910 wrote:

Hi, I am analysising the data after RNA seq, and want to plot the clusters of gene expression generated by the k-means algorithm. And the column of the data is time series. How should I do? my thought is first performing the k means algorithm and follow by the label by k means to plot the image one by one. but which package or what kind of methods should I use?

rna-seq k-means R cluster • 510 views
ADD COMMENTlink written 15 months ago by limin20170910

There are various tutorials out there that shows you how to do k-means clustering:

And the column of the data is time series. What do you mean? - you want to perform k-means separately on the different time-points?

ADD REPLYlink modified 15 months ago • written 15 months ago by Kevin Blighe43k
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 911 users visited in the last hour