Hi, I have E.coli genome re-sequencing data. I want to use this data to find or predict any result which related to drug resistance. I haven't had any experience about this . And now all I think is align re-sequencing data against to reference genome and get the SNPs file, So what should I do next ? I have no idea about this. Does anybody could give my some suggestions or hints? Any useful ideas or clues would be appreciated.