How to determine seq technology used in genome assembly?

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6.0 years ago

maximilian.mayerhofer ▴ 30

How do I determine the used sequence technology of a published genome?

For example: I have the list of all available genomes of L. pneumophilia (https://www.ncbi.nlm.nih.gov/genome/genomes/416). If I click on one strain (https://www.ncbi.nlm.nih.gov/assembly/GCA_001752885.1#/st) It should be listet in the assembly report. (E.g.: https://www.ncbi.nlm.nih.gov/assembly/GCA_000300315.1 here is the seq tech given in the report.) But it is not there. Is this just bad practice I can´t do anything about or is there a way to get to that info?

Best regards,
Max

sequencing • 758 views

ADD COMMENT • link updated 11 months ago by Ram 43k • written 6.0 years ago by maximilian.mayerhofer ▴ 30

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For the particular genome you complained (GCA_001752885.1), the info can be found at the paper:

ADD REPLY • link 6.0 years ago by h.mon 35k

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