Entering edit mode
6.5 years ago
maximilian.mayerhofer
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30
How do I determine the used sequence technology of a published genome?
For example: I have the list of all available genomes of L. pneumophilia (https://www.ncbi.nlm.nih.gov/genome/genomes/416). If I click on one strain (https://www.ncbi.nlm.nih.gov/assembly/GCA_001752885.1#/st) It should be listet in the assembly report. (E.g.: https://www.ncbi.nlm.nih.gov/assembly/GCA_000300315.1 here is the seq tech given in the report.) But it is not there. Is this just bad practice I canĀ“t do anything about or is there a way to get to that info?
Best regards,
Max
For the particular genome you complained (GCA_001752885.1), the info can be found at the paper:
Genomic Analysis Reveals Novel Diversity among the 1976 Philadelphia Legionnaires' Disease Outbreak Isolates and Additional ST36 Strains