convert locus tags or RvNumber to gene ID
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6.0 years ago
shimms.sa • 0

Is there any tool or software that can convert locus tags or RvNumber to Gene ID or Gene Name?

gene genome • 4.1k views
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Please furnish an example for input and expected output.

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You can do this using a Python script that interacts with Entrez's esearch utility, and the online DAVID tool can also do mappings. Take a look here: DAVID not accepting locus_tag identifiers. Alternatives?

You will have to customise the script to your own system and your species of interest.

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