Dear All, we have two different strains of bacteria. One has biocide resistance and another one doesn't. We try to find out which and how many mutations are involved in the resistance. I am thinking of sequencing the 2 strains and compare each other. I am not sure if this is a correct idea. Can someone give some pointers? And, regarding the comparison and variant identification, what tools I can use for this purpose?
Appreciate it in advance.