I am performing GSEA to study the enrichment of a particular geneset upon tumor induction. I have run the analysis using default parameters and the barcode plot generated only shows 10 significant genes enriched out of 215.
I want to know if it could imply biological significance, or have I made a mistake in the analysis?
I'm sorry for the incomplete information, I used the GSEA tool published by Broad Institute. The organism was human, and I was specifically looking into the HR Defect signature as described by Peng et al. The aim is study the enrichment of the geneset after tumor induction.