HI everyone ; can someone tell me where to find known indels.vcf and dbsnp.vcf for the GRCh38 reference genome Build thank's
Question: Download of dbSNP VCF file
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elhlalisoufiane • 10 wrote:
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modified 2.6 years ago
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Shicheng Guo • 8.5k
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2.6 years ago by
elhlalisoufiane • 10
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agata88 • 810 wrote:
See here: https://www.ncbi.nlm.nih.gov/variation/docs/human_variation_vcf/
Best, Agata
1
ATpoint ♦ 45k wrote:
dbSNP is the name of the entire database. The VCF files they provide include both SNPs and InDels. For quick retrieval of variantions in certain genomic regions, also download the .tbi
(tabix index) and make yourself familiar with the usage of Tabix. I edited the title of your question to make it more clear. Please try to choose more appropriate titles in the future. Cheers!
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