Hello, I am trying to set colors to my bed track based on column values using itemRgb on option. I have 1st 3 columns in my bed file for chrom, chromStart and chromEnd, 4th column has the values and 5th column has color codes for rgb for example 0,0,255. I converted the bed to bb format and used -
I am able to view the track all in black but not with the colors I want. Is it because my Rgb color values are not in column 9? Do I have to use all 9 columns mentioned here https://useast.ensembl.org/info/website/upload/bed.html to be able to use itemRgb or can I specify that the 5th column has the Rgb values? If I need all 9 columns, can the other column values be . or NA? Please let me know, I appreciate your help!