Question: Why are file names deleted during submission of RNA-seq data to ENA, after disabling editor mode.
gravatar for caggtaagtat
4 weeks ago by
caggtaagtat380 wrote:

Hi there,

I'm trying to submit RNA-seq data to the ENA database. In order to upload the files, I have to insert the file name into the right spot of my submission spreedsheet. However, no matter how I write the path + name of the file into the slot, it gets deleted after disabling the editor mode. What did I miss in the process? What do I have to change? The data comes from an extern harddrive, could that be an issue?

ena rna-seq fastq • 82 views
ADD COMMENTlink written 4 weeks ago by caggtaagtat380

Are you submitting though Annotare or not ? if it's RNAseq data (expression?) you'll more easily get it submitted to ArrayExpress (via Annotare) and they will take care of passing it on to ENA.

ADD REPLYlink modified 4 weeks ago • written 4 weeks ago by lieven.sterck3.3k

Ok, I will do that, thank you!

Edit: Access to ANNOTATE was restricted from the position of my PC, that's why I tried it via ENA. But I guess it's easier to just request clearing of the site from my institute. I was trying to upload RNA-seq data.

ADD REPLYlink modified 4 weeks ago • written 4 weeks ago by caggtaagtat380
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