Hi. I am new to Galaxy and bioinformatics so feel free to let me know if there is a better way of asking my question. The files were executed in a way that the MultiQC did not recognize the files existed. I downloaded SRA files to Galaxy. These files were transfered to a Paired-end data folder with each accession (sample) inside along with the forward and reverse fastq files. This general file format remains after running these Files through FastQC. Now, I am trying to run the files through MultiQC but the data is not recognized. Does anyone have suggestions on how to fix this?