Question: Segmentation fault (core dumped)
gravatar for Dineshkumar K
3 months ago by
Kasaragod, Kerala, India
Dineshkumar K10 wrote:

I have been using fastANI tool to calculate Average Nucleotide Identity (ANI) value of multiple bacterial genome for the past 5 months. But recently I am facing an error like "Segmentation fault (core dumped)". The detail error report is written below as shown in linux terminal,

arvind@arvind:~/Documents/dinesh/fastANI/fastani-Linux64-v1.0$ ./fastANI -q query.txt -r 1.txt -o test.txt

Reference = [1.txt]
Query = [query.txt]
Kmer size = 16
Fragment length = 3000
ANI output file = test.txt

INFO, skch::Sketch::build, minimizers picked from reference = 0
INFO, skch::Sketch::index, unique minimizers = 0
Segmentation fault (core dumped)

Please help me to fix this issue, Thank you in advance.

ADD COMMENTlink modified 3 months ago by WouterDeCoster37k • written 3 months ago by Dineshkumar K10
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