Question: about plot interaction network diagram in R
0
gravatar for 965589073
18 months ago by
9655890730
9655890730 wrote:

i read the article,the interaction network diagram is nice ,they say they plot it in R ,,the source node is RNA bind proteins ,target node is gene, i also want to plot it, source nodes is in a circle, but i don't know which R packages could plot it , could you tell me ? thank you very muchsource nodes to target nodes

rna-seq R gene • 1.1k views
ADD COMMENTlink written 18 months ago by 9655890730
1

See this tutorial by Katya Ognyanova. It is one of the most comprehensive ones with lots of examples:

ADD REPLYlink written 18 months ago by zx87549.4k

it's nice ,but i have no ideal

ADD REPLYlink written 18 months ago by 9655890730

965589073, you are not trying. Did you not look at the tutorial through the link provided by zx8754? There are various packages listed, including igraph, networkD3, visNetwork, et cetera.

ADD REPLYlink written 18 months ago by Kevin Blighe61k

ok,thank you , i am trying qgraph packages, i will try those packages

ADD REPLYlink written 18 months ago by 9655890730
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