Question: Fourfold degenerate codons in VCF File
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gravatar for crippa.to
8 days ago by
crippa.to0
crippa.to0 wrote:

Hi,

I want to extract the SNPs that have fourfold degenerate codons in a VCF file annotated by SNPEff. does anyone have an idea? I am new in VCF files.

Thanks

forum vcf genome • 78 views
ADD COMMENTlink modified 1 day ago by Biostar ♦♦ 20 • written 8 days ago by crippa.to0

Please only use "Forum" type posts for open-ended discussion. I've edited your question to a question type post, but please bear it in mind for the future.

ADD REPLYlink written 8 days ago by jrj.healey9.7k

Hello and welcome to biostars crippa.to ,

could you please show some example lines of your vcf and what do you expect in your output?

fin swimmer

ADD REPLYlink written 7 days ago by finswimmer8.9k
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