Question: Differentially expressed genes interactome
gravatar for mjdm
21 months ago by
mjdm0 wrote:

Hello everybody. Starting from RnaSeq data, my collegues were able to select all differentially expressed genes accordingly to the low/higher expression of our gene of interest in some tumour types. I would like to create such an interaction network, starting from these DE genes.

Any suggestion?

interactome deg rna-seq • 349 views
ADD COMMENTlink written 21 months ago by mjdm0

Something like this : Network plot from expression data in R using igraph ?

ADD REPLYlink written 21 months ago by Bastien Hervé4.8k

You could try Genemania?

ADD REPLYlink written 21 months ago by Gautier Richard340
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