Question: Differentially expressed genes interactome
0
gravatar for maria.giovanna.de.marino
7 weeks ago by

Hello everybody. Starting from RnaSeq data, my collegues were able to select all differentially expressed genes accordingly to the low/higher expression of our gene of interest in some tumour types. I would like to create such an interaction network, starting from these DE genes.

Any suggestion?

interactome deg rna-seq • 103 views
ADD COMMENTlink written 7 weeks ago by maria.giovanna.de.marino0
1

Something like this : Network plot from expression data in R using igraph ?

ADD REPLYlink written 7 weeks ago by Bastien Hervé3.6k

You could try Genemania?

ADD REPLYlink written 7 weeks ago by Gautier Richard260
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