Question: SNP-gene matrix construction
0
gravatar for Uday Rangaswamy
14 days ago by
Indian Institute of Technology, Madras, India
Uday Rangaswamy100 wrote:

What is the easiest way to build an SNP-gene matrix, with rows corresponding to SNPs and columns corresponding to genes regulated by the SNP? Any insight would be much appreciated.

snp R gene • 72 views
ADD COMMENTlink written 14 days ago by Uday Rangaswamy100

R ? https://cran.r-project.org/web/packages/seqminer/index.html

Python ?

C: parsing vcf file

ADD REPLYlink modified 14 days ago • written 14 days ago by Bastien Hervé3.3k
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