I am looking to calculate TMB for TCGA WES data and wonder what exome size should i use or if there is a way to get this information from TCGA.
Did you get answer to your question? I have been trying to get this answer but so far didn't able to found that.
You can find TMB data from this paper in the following file; mutation-load-updated.txt
Hello, mutation-load-updated.txt is log10 scale data? If I want TMP data do I need too sum silent and non-silent together?