Question: VCF Format in 1000 Genome
1
gravatar for khatami.mahshid
7 months ago by
khatami.mahshid10 wrote:

I am working with 1000 Genome VCF files, it has a format like this :

CHROM - POS - ID - REF - ALT - QUAL - FILTER - INFO - FORMAT - SAMPLE

SAMPLE column is like this : HG00117 - HG00215 - ...

I can't understand what is this column.

can anyone help me, please?

Thanks

snp • 312 views
ADD COMMENTlink written 7 months ago by khatami.mahshid10
3
gravatar for Pierre Lindenbaum
7 months ago by
France/Nantes/Institut du Thorax - INSERM UMR1087
Pierre Lindenbaum123k wrote:

can anyone help me, please?

sure: https://samtools.github.io/hts-specs/VCFv4.2.pdf

ADD COMMENTlink modified 7 months ago • written 7 months ago by Pierre Lindenbaum123k
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