Question: how to perform interaction and binding site between lncRNA and mRNA?
0
gravatar for abu_alezz
3 months ago by
abu_alezz0
abu_alezz0 wrote:

I have null hypotheses that lncRNA and mRNA have a correlation according to many articles and I couldn't find any database for lncRNA and mRNA to know which site they are binding... anyone can help me, please

genome gene • 177 views
ADD COMMENTlink modified 3 months ago by h.mon26k • written 3 months ago by abu_alezz0

How about this? - LncRNA2Target v2.0: a comprehensive database for target genes of lncRNAs in human and mouse (http://123.59.132.21/lncrna2target/)

ADD REPLYlink modified 3 months ago • written 3 months ago by Kevin Blighe44k

There is a correlation at gene expression levels/transcription between mRNA and it's putative lncRNA but other than that, there are several mechanisms about lncRNA function. I did not understand "binding" part. Do you mean the lncRNA binding to it's target mRNA ?

ADD REPLYlink written 3 months ago by geek_y9.7k

thank you for replying me sir, I found so many interaction databases about micRNA and their binding with other genes same as miRanda, TargetScan and PicTar. so what I want, it's about lncRNA targeting mRNA to indicate the binding site between in these two genes(lncRNA and mRNA) THANK YOU

ADD REPLYlink written 3 months ago by abu_alezz0
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1706 users visited in the last hour