Question: how to perform interaction and binding site between lncRNA and mRNA?
gravatar for abu_alezz
20 months ago by
abu_alezz0 wrote:

I have null hypotheses that lncRNA and mRNA have a correlation according to many articles and I couldn't find any database for lncRNA and mRNA to know which site they are binding... anyone can help me, please

genome gene • 467 views
ADD COMMENTlink modified 20 months ago by h.mon31k • written 20 months ago by abu_alezz0

How about this? - LncRNA2Target v2.0: a comprehensive database for target genes of lncRNAs in human and mouse (

ADD REPLYlink modified 20 months ago • written 20 months ago by Kevin Blighe67k

There is a correlation at gene expression levels/transcription between mRNA and it's putative lncRNA but other than that, there are several mechanisms about lncRNA function. I did not understand "binding" part. Do you mean the lncRNA binding to it's target mRNA ?

ADD REPLYlink written 20 months ago by geek_y11k

thank you for replying me sir, I found so many interaction databases about micRNA and their binding with other genes same as miRanda, TargetScan and PicTar. so what I want, it's about lncRNA targeting mRNA to indicate the binding site between in these two genes(lncRNA and mRNA) THANK YOU

ADD REPLYlink written 20 months ago by abu_alezz0
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