Question: Removal of contamints from RNA-seq data
0
gravatar for Liftedkris
12 months ago by
Liftedkris10
Germany
Liftedkris10 wrote:

Hi, I have a set of paired end RNAseq reads that are highly contaminated by rRNA, vectors, mtDNA, etc.

Now I need a bioinformatic tool to remove these contaminants from these files.. please could anyone suggest for me a tool to use or how to remove these contaminants from the files?

Thanks

rna-seq • 347 views
ADD COMMENTlink written 12 months ago by Liftedkris10

Please use the search function, starting with

How to remove contamination from the transcriptome assembly

Filtering of RNA fastq files prior to aligment

ADD REPLYlink modified 12 months ago • written 12 months ago by ATpoint31k
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