Question: Removal of contamints from RNA-seq data
0
gravatar for Liftedkris
18 months ago by
Liftedkris20
Germany
Liftedkris20 wrote:

Hi, I have a set of paired end RNAseq reads that are highly contaminated by rRNA, vectors, mtDNA, etc.

Now I need a bioinformatic tool to remove these contaminants from these files.. please could anyone suggest for me a tool to use or how to remove these contaminants from the files?

Thanks

rna-seq • 601 views
ADD COMMENTlink written 18 months ago by Liftedkris20

Please use the search function, starting with

How to remove contamination from the transcriptome assembly

Filtering of RNA fastq files prior to aligment

ADD REPLYlink modified 18 months ago • written 18 months ago by ATpoint39k
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