How to split Fastq file into Forward, reverse fastq file.
0
0
Entering edit mode
3.4 years ago
9521ljh ▴ 50

Hi. i have SRR0000.sra file.

and i have SRR0000.fastq using SRA toolkit.

then i want to split it forward fastq and reverse fastq. how to????

i try to use SRA toolkit - fastq-dump -I --split-files SRR0000.sra

but the output is just the half of file. i don't think it is right for forward and reverse.

gene sequencing sequence genome • 2.1k views
ADD COMMENT
1
Entering edit mode

this issue has been mentioned before, even here on biostars:

How to split paired end SRA file into 2 correct fastq files

in other words, have you tried looking for an answer before posting your question?

ADD REPLY

Login before adding your answer.

Traffic: 1329 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6