Annotating draft genome of a Trichomonad species

Question

[shinasplitzo]

Can anyone please provide help with annotating a draft genome of a novel Trichomonad? Lots of data available for close relatives.

Thanks :)

[GenoMax]

Since you added maker as a tag you obviously know about that program. It would probably be the best bet to start with.

Answer 1

[Michael]

You could try GenSAS. It has all the tools needed to do a de-novo annotation. It uses BRAKER instead of MAKER, but therefore everything is integrated into a single web-frontend with a step-by-step work-flow.