Question: (Closed) Problem to install Pearl module Math CDF
0
gravatar for fagambaro3
5 months ago by
fagambaro30
fagambaro30 wrote:

Trying to install Pearl module Math CDF I have the following error after $make install

cd cdflib && make LIBPERL_A="libperl.a" LINKTYPE="dynamic" OPTIMIZE="-O2 -g" LD="x86_64-linux-gnu-gcc" PREFIX="/usr/local" PASTHRU_DEFINE=' ' PASTHRU_INC=' '
make[1]: Entering directory '/mnt/c/Users/Fabiana/Documents/Math-CDF-0.1/cdflib'
make[1]: Leaving directory '/mnt/c/Users/Fabiana/Documents/Math-CDF-0.1/cdflib'
make[1]: Entering directory '/mnt/c/Users/Fabiana/Documents/Math-CDF-0.1/cdflib'
make[1]: Nothing to be done for 'all'.
make[1]: Leaving directory '/mnt/c/Users/Fabiana/Documents/Math-CDF-0.1/cdflib'
"/usr/bin/perl" -MExtUtils::Command::MM -e 'cp_nonempty' -- CDF.bs blib/arch/auto/Math/CDF/CDF.bs 644
Manifying 1 pod document
Files found in blib/arch: installing files in blib/lib into architecture dependent library tree
!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
ERROR: Can't create '/usr/local/lib/x86_64-linux-gnu/perl/5.26.1/Math'
mkdir /usr/local/lib/x86_64-linux-gnu: Permission denied at /usr/share/perl/5.26/ExtUtils/Install.pm line 477.

!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
 at -e line 1.
Makefile:802: recipe for target 'pure_site_install' failed
make: *** [pure_site_install] Error 13

Does anyone knows how to solve it??

Thanks!!

Fabiana

software error • 198 views
ADD COMMENTlink modified 5 months ago by RamRS27k • written 5 months ago by fagambaro30

Hello fagambaro3!

We believe that this post does not fit the main topic of this site.

This is not a bioinformatics question, please search/ask StackOverflow

For this reason we have closed your question. This allows us to keep the site focused on the topics that the community can help with.

If you disagree please tell us why in a reply below, we'll be happy to talk about it.

Cheers!

P.S: Carrying over from my deleted comments:

Have you tried installing via CPAN? cpan Math::CDF should do it. There is a conda package too - bioconda/perl-math-cdf

ADD REPLYlink modified 5 months ago • written 5 months ago by RamRS27k

Sorry, I am new at using blogs to ask questions, so I am bit lost! Sorry and thanks!

P.S you were right, " conda install -c bioconda perl-math-cdf" .. worked perfectly!!

ADD REPLYlink written 5 months ago by fagambaro30
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