Question: How to make blast+ 2.2.26 works in a Mac?
0
gravatar for mahnazkiani
3 months ago by
mahnazkiani50
United States
mahnazkiani50 wrote:

Hello,

I am trying to figure out how to do blast for the denovoassembay results, I don't have access to supercomputer and looking for a way that I can do it in my Mac, any suggestions?

Thanks

alignment assembly • 150 views
ADD COMMENTlink modified 3 months ago • written 3 months ago by mahnazkiani50

Thank you so much, I was trying to use that version because CyVerse have the app for this version, although when I wanted to create a database it failed, and when I contacted them, they said that " if you want to run BLAST against nr nt databases, please check bigger compute resources such as Jetstream, TAMU." I will try to use the newest version that you recommend.

ADD REPLYlink written 3 months ago by mahnazkiani50

Please use ADD COMMENT to reply to answers. This keeps the thread logically organized.

ADD REPLYlink written 3 months ago by ATpoint36k
1
gravatar for lumal29
3 months ago by
lumal2980
Montreal
lumal2980 wrote:

Do you specifically need this version? If so, you can find the link to download it here. It seems there is a version for Mac.

But you can also download the latest version 2.10.0 here.

What you need to do is to unzip it and then use a terminal to use the tools in the "bin" folder inside the blast folder. I'm on Windows and that's how I do it, but it should be the same for Mac.

Here is the manual, even if I think it is not really user friendly.

Hope it will help!

ADD COMMENTlink written 3 months ago by lumal2980
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