Question: (Closed) basic of bioinformatics
0
gravatar for geethus2009
7 months ago by
geethus20090 wrote:

suppose the amino acid sequence is given as below

MSTHDTSLKTTEEVAFQIILLCQFGVGTFANVFLFVYNFSPISTGSKQRPRQVILRHMAVANALTLFLTIFPNNMMTFAPIIPQTDLKCKLEFFTRLVARSTNLCSTCVLSIHQFVTLVPVNSGKGILRASVTNMASYSCYSCWFFSVLNNIYIPIKVTGPQLTDNNNNSKSKLFCSTSDFSVGIVFLRFAHDATFMSIMVWTSVSMVLLLHRHCQRMQYIFTLNQDPRGQAETTATHTILMLVVTFVGFYLLSLICIIFYTYFIYSHHSLRHCNDILVSGFPTISPLLLTFRDPKGPCSVFFNC

Is no of residues equal to no of an amino acid? Whether all amino acid contributes to the secondary structure of the protein? how can I construct a secondary structure of the above sequence? how I can get secondary structure-related information of an amino acid? How to construct a template for the given sequence? where to get template structure-related information? how can I compare it with the given sequence?

amino acid • 173 views
ADD COMMENTlink modified 7 months ago by Kevin Blighe67k • written 7 months ago by geethus20090
3

The way you are asking these question makes me think that you know little or nothing about these subjects. It that's the case, I would guess that you didn't just wake up with these questions in mind, and that you have an assignment. Assuming again that I am correct, I don't think we should be helping with your assignments as that undermines the learning process established by your instructor(s).

Separately, each question after the first two - it is yes to both of them - would take a lot of time to answer properly given your (lack of) background. Yet it is very easy to research all of them using available internet resources.

ADD REPLYlink written 7 months ago by Mensur Dlakic7.2k

Hello geethus2009!

It appears that your post has been cross-posted to another site: https://bioinformatics.stackexchange.com/questions/13131/structure-prediction

This is typically not recommended as it runs the risk of annoying people in both communities.

ADD REPLYlink written 7 months ago by _r_am31k

Hello geethus2009!

We believe that this post does not fit the main topic of this site.

See Mensur's comment. You should read a couple of basic books/articles.

For this reason we have closed your question. This allows us to keep the site focused on the topics that the community can help with.

If you disagree please tell us why in a reply below, we'll be happy to talk about it.

Cheers!

ADD REPLYlink written 7 months ago by _r_am31k
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