Question: help me creating Prokka custom database
0
gravatar for tasbd4
4 weeks ago by
tasbd40
tasbd40 wrote:

Hello good souls.

I am new to Bioinformatics. COuld you please help me creating database in prokka? I would like to create a custom database with one bacteriophage Nucleotide fasta file and Amino acids fasta file for complete annotation.

ADD COMMENTlink modified 4 weeks ago by Joe17k • written 4 weeks ago by tasbd40

This should help you: https://github.com/tseemann/prokka#databases https://github.com/tseemann/prokka/issues/210

ADD REPLYlink written 4 weeks ago by gayachit200
1
gravatar for Joe
4 weeks ago by
Joe17k
United Kingdom
Joe17k wrote:

You don't need to 'do' anything. Just pass a trusted fasta formatted file of protein sequences to the --proteins flag of prokka.

ADD COMMENTlink written 4 weeks ago by Joe17k
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