I am new to scRNA-seq analysis. I have used CellRanger's count pipeline to get gene expression matrices for downstream analysis with Seurat. I am attempting to get a similar expression matrix from Fluidigm C1 data to incorporate into my Seurat analysis, but I'm not sure what the best software to use is. On the Fluidigm website they offer a Singular Analysis Toolset but mention that it is not appropriate for bulk gene expression analysis. I have a couple hundred GB's of data and need to analyze them on my cluster. Does anyone know what software I should use?