Hi all, I am a post-doctoral fellow from India. When I am running kaiju through command line interface, the process gets killed at the Running kaiju step. Until this step, everything is alright. I am not getting output exactly at this step and the process gets killed at this step. Why is this happening? Is this because of less RAM capacity? We are using a system with 4GB RAM processor and 1TB hard disk storage. Kindly reply. Please somebody help.
As noted in this
kaiju GitHub link running
nr-euk database needs 117G of RAM.
We are using a system with 4GB RAM processor and 1TB hard disk storage
You don't have enough resources to run
kaiju on this machine. That is the reason your job likely gets killed.