Entering edit mode
2.9 years ago
How to sort a GFF/GTF file?
I saw this question many times and the answer is not simple because those formats can be sorted in different ways.
I made a mini-review of common tools manipulating GFF/GTF to see how they sort the files: https://github.com/NBISweden/AGAT/wiki/Topological-sorting-of-gff-features