Question

Merge .ffn files into one .fasta file

0

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3.8 years ago

alexa.fitzpatrick ▴ 10

Hello,

I want to merge a set of .ffn files into one single fasta file. Thanks

fasta ffn • 975 views

ADD COMMENT • link 3.8 years ago by alexa.fitzpatrick ▴ 10

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There are 5321 ffn files all in a folder, can I just drag the folder in so it looks like so:

$ cat [drag in folder] > newfile.fasta

Thanks!

ADD REPLY • link updated 3.8 years ago by Arup Ghosh 3.2k • written 3.8 years ago by alexa.fitzpatrick ▴ 10

score 0 · Answer 1 · 2020-07-17

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3.8 years ago

GenoMax 142k

You can cat them together and redirect to a new filename.

ADD COMMENT • link 3.8 years ago by GenoMax 142k

0

Entering edit mode

There are 5321 ffn files all in a folder, can I just drag the folder in so it looks like so: $ cat [drag in folder] > newfile.fasta

Thanks!

ADD REPLY • link 3.8 years ago by alexa.fitzpatrick ▴ 10

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Entering edit mode

All good, that worked, thanks

ADD REPLY • link 3.8 years ago by alexa.fitzpatrick ▴ 10