SRA ftp site change?
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Entering edit mode
3.7 years ago

Hi all,

I used to be able to download .sra files from SRA in the following way:

$ nohup wget -c ftp://ftp-trace.ncbi.nih.gov/sra/sra-instant/reads/ByRun/sra/SRR/SRR165/SRR1657561/SRR1657561.sra

However, now it seems this file path no longer exists, and SRA does not have the "ftp://ftp-trace.ncbi.nih.gov/sra/sra-instant" file path anymore. Does anyone know which path to use now?

Thanks!

fastq SRA ftp • 4.1k views
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Entering edit mode
3.7 years ago
GenoMax 142k

NCBI has moved SRA data to cloud storage. NCBI, Google and Amazon AWS versions are available. Here is link for your data. Save with .sra and then extract. Available under Data Access tab on this page.

Use EBI-ENA to get sequence data where possible. Click on Read Files - Show to see the links for download for your data.

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