Question: Reactome for Plants
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gravatar for Ric
5 days ago by
Ric300
Australia
Ric300 wrote:

Hi, I downloaded the mapping files from Plant Reactome. How is it possible to map Reactome ids

==> NCBI2PlantReactome_PE_Pathway.txt <==
A0A1R3FTW0  R-COL-9609608-16    A0A1R3FTW0 [cytosol]    R-COL-9609573   https://plantreactome.gramene.org/PathwayBrowser/#/R-COL-9609573    Tricin biosynthesis none    Corchorus olitorius
A0A1R3FU96  R-COL-1122726-203   A0A1R3FU96 [cytosol]    R-COL-1119265   https://plantreactome.gramene.org/PathwayBrowser/#/R-COL-1119265    Tetrahydrofolate biosynthesis I none    Corchorus olitorius
A0A1R3FU96  R-COL-1122726-203   A0A1R3FU96 [cytosol]    R-COL-1119523   https://plantreactome.gramene.org/PathwayBrowser/#/R-COL-1119523    Tetrahydrofolate biosynthesis II    none    Corchorus olitorius
A0A1R3FUB5  R-COL-1122726-100   A0A1R3FUB5 [cytosol]    R-COL-1119265   https://plantreactome.gramene.org/PathwayBrowser/#/R-COL-1119265    Tetrahydrofolate biosynthesis I none    Corchorus olitorius
A0A1R3FUB5  R-COL-1122726-100   A0A1R3FUB5 [cytosol]    R-COL-1119523   https://plantreactome.gramene.org/PathwayBrowser/#/R-COL-1119523    Tetrahydrofolate biosynthesis II    none    Corchorus olitorius

for example to NR blast results ids XP_015159008.1 ?

annotation gene pathway • 41 views
ADD COMMENTlink written 5 days ago by Ric300
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