Plotting summary Log2FC - Group A v B
0
0
Entering edit mode
10 months ago

Hi.

I've generated some RNA-seq data and have my list of DE genes between two groups and fold-changes (log2FC).

I'd like to be able to plot a summary heatmap of log2FC for this group comparison in a single bar similar to the one in this paper for Figure4A. Would anyone happen to know ideas on how I could put together a ggplot script for this?

enter image description here

RNA-Seq ggplot Log2FC singlebarheatmap • 386 views
ADD COMMENT
0
Entering edit mode

Please read the documentation of heatmap packages, such as ComplexHeatmap. Biostars is generally not a code writing service, therefore it is expected that you show what you've tried so far.

ADD REPLY

Login before adding your answer.

Traffic: 1770 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6