Blast output representation
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21 months ago

Hi, Is it possible to represent the blast output I got in the form of a histogram or pie-chart? If yes, then how? I have the output using a local version of blast. I have the outputs in a pairwise alignment format as well as the one displaying the concise results.

alignment • 358 views
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I can imagine the use for histogram (e.g. to plot HSP score distributions) and pie-chart (e.g. to plot % of sequences from the db hit by your query), but this is limited to special use-cases. It really depends on what you want to show.

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Say for showing the sequence similarity or to show the orthologs. Or, to show sequence variation between the orthologs. Is there any way for me to show the common genes and the unique genes from the output?

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Say for showing the sequence similarity or to show the orthologs.

You should consider doing multiple sequence alignments/phylogenetic trees then.

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