Question: blast+ v2.10.1. error Error: mdb_env_open: Cannot allocate memory
0
gravatar for MEITUO
3 days ago by
MEITUO10
MEITUO10 wrote:

hi everyone!

i am using blast+ to make db, but i one error

command line:

ncbi-blast-2.10.1+/bin/makeblastdb -in plasmid_refseq.fasta -dbtype nucl -parse_s

error:

Keep MBits: T
Maximum file size: 1000000000B

No volumes were created.
Error: mdb_env_open: Cannot allocate memory
ADD COMMENTlink modified 3 days ago by genomax91k • written 3 days ago by MEITUO10
1

You appear to have posted an incomplete command in your original post. I assume the last option is -parse_seqid. How much memory do you have on your machine and what is the size of the file you are working with. At first glance it appears that you do not have enough memory available.

ADD REPLYlink written 3 days ago by genomax91k
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