Question: KEGG pathway IDs
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gravatar for mrashad
29 days ago by
mrashad40
mrashad40 wrote:

If I have some KEGG pathways for some bacteria in human gut and I need their IDs. Will there be like KEGG pathways ID of human or there are changes ?

for example: ID of Glycolysis / Gluconeogenesis pathway in human is: hsa00010

Is this ID the same ID for Glycolysis / Gluconeogenesis in bacteria [whatever its type] that found in human gut .

Thanks in advance.

#pathway_analysis #16srrna • 105 views
ADD COMMENTlink modified 28 days ago • written 29 days ago by mrashad40

Would you please provide more details about your research question? Obviously KEGG identifiers are species-specific.

ADD REPLYlink written 29 days ago by Hamid Ghaedi710

I just need to find the complementary pathways (using pathwayconnector tool) for some pathways enriched in gut bacteria [ these gut bacteria is genus_Ruminococcus, genus_Dorea, genus_Clostridium], for using pathwayconnector tool I should use KEGG ID input and I couldn't find out the KEGG ID for the pathways of these gut bacteria.

ADD REPLYlink written 28 days ago by mrashad40
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