Creating in house database of variants

Question

[thisisinspiredme08]

I am hoping to help our institution (clinical lab) create a database that logs all of our variants and associated interpretations/patient information to be used in house as a reference for future interpretations. We are a relatively new clinical genomics lab and I'm wondering if anyone has something in place that they find works? It's preferred for the database to be simple to use/clickable/searchable. I was thinking some sort of shinyapp but maybe someone knows a better route to go?

Thanks for any input.

Answer 1

[Pierre Lindenbaum]

the database for gnomad is open-source: https://github.com/broadinstitute/gnomad-browser