Hi All, I have a featurecount output row counts and need to convert them to FPKM. I knew about the countToFPKM package, however, the description of the package says its for paired end RNA seq data. My data are single end. Could I still use this package? and if not could you please suggest an easy way to do it?
The reason I need to convert from row counts to FPKM is to perform ssGSEA analyses on gene pattern. Thanks.