I have found that JGI provides completed sequencing of many genomes with annotation (http://genome.jgi-psf.org/ChlNC64A_1/ChlNC64A_1.download.ftp.html). However I have some questions regarding file format. They provide Assembly, Annotation files but there is no single file which contains the complete genome of particular organism like NCBI provides various standard formats like .FNA and .GBK
My question: 1) Where to find complete genome sequence of respected organism in ".FNA' format? 2) Where can i find complete annotated format of particular genome in ".GBK OR.GB" format ? 3) If .fna and .gbk file is not available, how can I generate .gbk file and .fna file from available data? Please inform or suggest options for me regarding this issue.