Similar posts • Search »

• Variants effect predict
  Now I have some mutation information on some sites in vcf format? How can I predict if these muta...
• Predict if the mutation is activating or deactivating
  Hi there, Does anyone know a tool that can predict whether a given SNV/INDEL has activating or d...
• Is there a tool to predict if a missense variant causes a loss of function on the protein?
  Good morning, Does anybody know wether there is a tool to predict the effect (loss or gain of fun...
• Prediction Of Mutation Impact
  Hi, am trying to "predict the effect of mutation impact on protein function", am trying to get f...
• Mutational Effects In Trna
  Hi It was easy to learn the possible mutational effects for protein with so much literature avai...
• Tool/algorithm to assess the effect of several mutations
  Searching for a tool that could (try to) predict which pathways are predicted to be affected by s...
• PolyPhen Humdiv vs HumVar discrepancies
  Dear all, as far as I know Polyphen2 (http://genetics.bwh.harvard.edu/pph2/) predicts variant ef...
• Methods for integrating in vitro information to predict enzyme activity
  Our group has measured Kcat on a WT enzyme and 28 single-AA substitution variants. How would one ...
• Predict effect of pH on enzymatic activity
  Hi all, I was wondering... given the 3D structure of an enzyme, is it possible to predict the ef...
• Svm-Predict Input File Format
  I'm trying to classify reads using libSVM (tetramer frequencies). I have a trained model but I c...
• Mutation effect on splicing
  Hello Can you please introduce me database which can predict possible effect of a mutation in Int...
• How to improve svm model accuracy using weka?
  Hi All, I have using svm classification for my dataset.But roc values is 0.65.How to improve my ...
• loss of function prediction
  Hello everyone, I am using snpeff for variant annotation and effect prediction. For my genes of ...
• How to compile a list of non-cancerous mutations
  I am trying to perform a one-class classification of driver vs non-driver mutations. I have a lis...
• mutations causing predicted gene loss of function in healthy individual - WGS
  Just for interest, I had my whole genome re-seqeunced (BGISEQ-500, 30X coverage). Variants were ...
• How to predict the effect of DNA base deletion on protein?
  I was wondering if any tool is available to predict the effect of DNA base deletion at protein le...