Hello guys, I need some illumina Infinium Methylation 450K demo data to play. I have search online for a long time , but can only find some tools like IMA(Illumina Methylation Analyzer) and methylumi etc. Is anybody know some databases provide illumina Infinium Methylation 450K demo data ? Thanks a lot .
There is publicly-available 450K data in The Cancer Genome Atlas (TCGA).
It's a little difficult to navigate for new users. I would start with the data matrix and select, for example COAD (colon adenocarcinoma), then DNA Methylation under Data Type. You should then see JHU_USC HumanMethylation450 under Center/Platform.
You'll need to spend some time reading the TCGA documentation to figure out their barcode system.