Secondary Structure Of A Protein In Biojava

Question

[potassiumiodide0990]

Is there any biojava method which i can implement to predict the secondary structure of a protein for a given amino acid sequence?

I came across this class SecondaryStructureFeatureRenderer... but i am not understanding how to use its constructor... Class SecondaryStructureFeatureRenderer link

please help

[AsoInfo]

You want to create a program for the secondary structure prediction or you want to predict a secondary structure of a protein?

[potassiumiodide0990]

i want to create a program for secondary structure prediction

[João Rodrigues]

Use an existing one.. Jpred for example. Otherwise, take some time to read about it before committing to make your own.

Answer 1

[joey0214.zhong]

ha, I also want to do this ~ have you figured out it ?

[Pierre Lindenbaum]

this should be a comment, not an answer.