Question: Genome Browsers / Visualization Tools Compatible With Sanger Reads
3
gravatar for Khader Shameer
5.2 years ago by
Manhattan, NY
Khader Shameer17k wrote:

We are validating variants identified from our WES study. I have used Consed for visualizing Sanger reads, but wondering if there is any modern tool/genome browser for visualizing Sanger reads and related file formats ?

visualization • 1.1k views
ADD COMMENTlink modified 5.2 years ago by lh330k • written 5.2 years ago by Khader Shameer17k
3
gravatar for lh3
5.2 years ago by
lh330k
United States
lh330k wrote:

IGV, gap5 and samtools tview are known to work. In addition, most BAM based viewers should scale nicely from 100bp reads to >100kb BAC alignment.

ADD COMMENTlink written 5.2 years ago by lh330k
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